/*Calculates the correlation value between a 70 frame reference slice and an adjacent 75 frames test slice.*/

//Select 70 frame reference slice.
rename("X1");

//Select 75 frame test slice.
rename("X2");

//Measure arithmetic mean of all frames (70) in reference slice. If numbers of frames are different from 70 then adjust number of rows.
selectWindow("X1");
run("Set Measurements...", "mean redirect=None decimal=5");
IJ.deleteRows(0, 5249);
run("Clear Results");
selectWindow("X1");
setSlice(1);
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
run("Images to Stack", "name=u1 title=[] use");
selectWindow("u1");
run("Size...", "width=772 height=600 depth=70 average interpolation=Bilinear");

//Measure standard deviation of all frames (70) in reference slice. If numbers of frames are different from 70 then adjust number of rows.
run("Set Measurements...", "standard redirect=None decimal=5");
run("Clear Results");
selectWindow("X1");
setSlice(1);
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X1");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
run("Images to Stack", "name=d1 title=[] use");
selectWindow("d1");
run("Size...", "width=772 height=600 depth=70 average interpolation=Bilinear");

//Calculate left side (Image 1) of correlation value equation (6).
imageCalculator("Subtract create stack", "X1","u1");
imageCalculator("Divide create stack", "Result of X1","d1");
rename("Y1");
selectWindow("Result of X1");
close();
selectWindow("u1");
close();
selectWindow("d1");
close();
selectWindow("X1");
close();

//Measure arithmetic mean of all frames (75) in test slice. If numbers of frames are different from 75 then adjust number of rows.
selectWindow("X2");
run("Set Measurements...", "mean redirect=None decimal=5");
IJ.deleteRows(0, 5249);
run("Clear Results");
selectWindow("X2");
setSlice(1);
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
run("Images to Stack", "name=u2 title=[] use");
selectWindow("u2");
run("Size...", "width=772 height=600 depth=75 average interpolation=Bilinear");
run("Set Measurements...", "standard redirect=None decimal=5");
run("Clear Results");

//Measure standard deviation of all frames (75) in test slice. If numbers of frames are different from 75 then adjust number of rows.
selectWindow("X2");
setSlice(1);
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
selectWindow("X2");
run("Next Slice [>]");
run("Measure");
run("Results to Image");
run("Clear Results");
run("Images to Stack", "name=d2 title=[] use");
selectWindow("d2");
run("Size...", "width=772 height=600 depth=75 average interpolation=Bilinear");

//Calculate right side (Image 2) of correlation value equation (6).
imageCalculator("Subtract create stack", "X2","u2");
imageCalculator("Divide create stack", "Result of X2","d2");
rename("Y2");
selectWindow("Result of X2");
close();
selectWindow("u2");
close();
selectWindow("d2");
close();
selectWindow("X2");
close();

//Calculate correlation values for all 70 x 75 image comparisons.
run("Set Measurements...", "mean display redirect=None decimal=5");
selectWindow("Y1");
makeRectangle(0, 0, 772, 600);
run("ROI Manager...");
roiManager("Add");
run("Clear Results");
selectWindow("Y1");
run("Make Substack...", "  slices=1");
imageCalculator("Multiply create stack", "Y2","Substack (1)");
selectWindow("Result of Y2");
rename("1");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (1)");
close();
selectWindow("1");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=2");
imageCalculator("Multiply create stack", "Y2","Substack (2)");
selectWindow("Result of Y2");
rename("2");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (2)");
close();
selectWindow("2");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=3");
imageCalculator("Multiply create stack", "Y2","Substack (3)");
selectWindow("Result of Y2");
rename("3");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (3)");
close();
selectWindow("3");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=4");
imageCalculator("Multiply create stack", "Y2","Substack (4)");
selectWindow("Result of Y2");
rename("4");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (4)");
close();
selectWindow("4");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=5");
imageCalculator("Multiply create stack", "Y2","Substack (5)");
selectWindow("Result of Y2");
rename("5");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (5)");
close();
selectWindow("5");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=6");
imageCalculator("Multiply create stack", "Y2","Substack (6)");
selectWindow("Result of Y2");
rename("6");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (6)");
close();
selectWindow("6");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=7");
imageCalculator("Multiply create stack", "Y2","Substack (7)");
selectWindow("Result of Y2");
rename("7");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (7)");
close();
selectWindow("7");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=8");
imageCalculator("Multiply create stack", "Y2","Substack (8)");
selectWindow("Result of Y2");
rename("8");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (8)");
close();
selectWindow("8");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=9");
imageCalculator("Multiply create stack", "Y2","Substack (9)");
selectWindow("Result of Y2");
rename("9");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (9)");
close();
selectWindow("9");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=10");
imageCalculator("Multiply create stack", "Y2","Substack (10)");
selectWindow("Result of Y2");
rename("10");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (10)");
close();
selectWindow("10");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=11");
imageCalculator("Multiply create stack", "Y2","Substack (11)");
selectWindow("Result of Y2");
rename("11");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (11)");
close();
selectWindow("11");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=12");
imageCalculator("Multiply create stack", "Y2","Substack (12)");
selectWindow("Result of Y2");
rename("12");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (12)");
close();
selectWindow("12");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=13");
imageCalculator("Multiply create stack", "Y2","Substack (13)");
selectWindow("Result of Y2");
rename("13");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (13)");
close();
selectWindow("13");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=14");
imageCalculator("Multiply create stack", "Y2","Substack (14)");
selectWindow("Result of Y2");
rename("14");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (14)");
close();
selectWindow("14");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=15");
imageCalculator("Multiply create stack", "Y2","Substack (15)");
selectWindow("Result of Y2");
rename("15");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (15)");
close();
selectWindow("15");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=16");
imageCalculator("Multiply create stack", "Y2","Substack (16)");
selectWindow("Result of Y2");
rename("16");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (16)");
close();
selectWindow("16");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=17");
imageCalculator("Multiply create stack", "Y2","Substack (17)");
selectWindow("Result of Y2");
rename("17");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (17)");
close();
selectWindow("17");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=18");
imageCalculator("Multiply create stack", "Y2","Substack (18)");
selectWindow("Result of Y2");
rename("18");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (18)");
close();
selectWindow("18");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=19");
imageCalculator("Multiply create stack", "Y2","Substack (19)");
selectWindow("Result of Y2");
rename("19");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (19)");
close();
selectWindow("19");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=20");
imageCalculator("Multiply create stack", "Y2","Substack (20)");
selectWindow("Result of Y2");
rename("20");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (20)");
close();
selectWindow("20");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=21");
imageCalculator("Multiply create stack", "Y2","Substack (21)");
selectWindow("Result of Y2");
rename("21");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (21)");
close();
selectWindow("21");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=22");
imageCalculator("Multiply create stack", "Y2","Substack (22)");
selectWindow("Result of Y2");
rename("22");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (22)");
close();
selectWindow("22");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=23");
imageCalculator("Multiply create stack", "Y2","Substack (23)");
selectWindow("Result of Y2");
rename("23");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (23)");
close();
selectWindow("23");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=24");
imageCalculator("Multiply create stack", "Y2","Substack (24)");
selectWindow("Result of Y2");
rename("24");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (24)");
close();
selectWindow("24");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=25");
imageCalculator("Multiply create stack", "Y2","Substack (25)");
selectWindow("Result of Y2");
rename("25");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (25)");
close();
selectWindow("25");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=26");
imageCalculator("Multiply create stack", "Y2","Substack (26)");
selectWindow("Result of Y2");
rename("26");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (26)");
close();
selectWindow("26");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=27");
imageCalculator("Multiply create stack", "Y2","Substack (27)");
selectWindow("Result of Y2");
rename("27");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (27)");
close();
selectWindow("27");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=28");
imageCalculator("Multiply create stack", "Y2","Substack (28)");
selectWindow("Result of Y2");
rename("28");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (28)");
close();
selectWindow("28");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=29");
imageCalculator("Multiply create stack", "Y2","Substack (29)");
selectWindow("Result of Y2");
rename("29");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (29)");
close();
selectWindow("29");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=30");
imageCalculator("Multiply create stack", "Y2","Substack (30)");
selectWindow("Result of Y2");
rename("30");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (30)");
close();
selectWindow("30");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=31");
imageCalculator("Multiply create stack", "Y2","Substack (31)");
selectWindow("Result of Y2");
rename("31");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (31)");
close();
selectWindow("31");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=32");
imageCalculator("Multiply create stack", "Y2","Substack (32)");
selectWindow("Result of Y2");
rename("32");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (32)");
close();
selectWindow("32");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=33");
imageCalculator("Multiply create stack", "Y2","Substack (33)");
selectWindow("Result of Y2");
rename("33");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (33)");
close();
selectWindow("33");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=34");
imageCalculator("Multiply create stack", "Y2","Substack (34)");
selectWindow("Result of Y2");
rename("34");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (34)");
close();
selectWindow("34");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=35");
imageCalculator("Multiply create stack", "Y2","Substack (35)");
selectWindow("Result of Y2");
rename("35");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (35)");
close();
selectWindow("35");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=36");
imageCalculator("Multiply create stack", "Y2","Substack (36)");
selectWindow("Result of Y2");
rename("36");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (36)");
close();
selectWindow("36");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=37");
imageCalculator("Multiply create stack", "Y2","Substack (37)");
selectWindow("Result of Y2");
rename("37");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (37)");
close();
selectWindow("37");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=38");
imageCalculator("Multiply create stack", "Y2","Substack (38)");
selectWindow("Result of Y2");
rename("38");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (38)");
close();
selectWindow("38");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=39");
imageCalculator("Multiply create stack", "Y2","Substack (39)");
selectWindow("Result of Y2");
rename("39");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (39)");
close();
selectWindow("39");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=40");
imageCalculator("Multiply create stack", "Y2","Substack (40)");
selectWindow("Result of Y2");
rename("40");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (40)");
close();
selectWindow("40");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=41");
imageCalculator("Multiply create stack", "Y2","Substack (41)");
selectWindow("Result of Y2");
rename("41");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (41)");
close();
selectWindow("41");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=42");
imageCalculator("Multiply create stack", "Y2","Substack (42)");
selectWindow("Result of Y2");
rename("42");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (42)");
close();
selectWindow("42");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=43");
imageCalculator("Multiply create stack", "Y2","Substack (43)");
selectWindow("Result of Y2");
rename("43");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (43)");
close();
selectWindow("43");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=44");
imageCalculator("Multiply create stack", "Y2","Substack (44)");
selectWindow("Result of Y2");
rename("44");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (44)");
close();
selectWindow("44");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=45");
imageCalculator("Multiply create stack", "Y2","Substack (45)");
selectWindow("Result of Y2");
rename("45");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (45)");
close();
selectWindow("45");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=46");
imageCalculator("Multiply create stack", "Y2","Substack (46)");
selectWindow("Result of Y2");
rename("46");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (46)");
close();
selectWindow("46");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=47");
imageCalculator("Multiply create stack", "Y2","Substack (47)");
selectWindow("Result of Y2");
rename("47");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (47)");
close();
selectWindow("47");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=48");
imageCalculator("Multiply create stack", "Y2","Substack (48)");
selectWindow("Result of Y2");
rename("48");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (48)");
close();
selectWindow("48");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=49");
imageCalculator("Multiply create stack", "Y2","Substack (49)");
selectWindow("Result of Y2");
rename("49");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (49)");
close();
selectWindow("49");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=50");
imageCalculator("Multiply create stack", "Y2","Substack (50)");
selectWindow("Result of Y2");
rename("50");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (50)");
close();
selectWindow("50");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=51");
imageCalculator("Multiply create stack", "Y2","Substack (51)");
selectWindow("Result of Y2");
rename("51");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (51)");
close();
selectWindow("51");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=52");
imageCalculator("Multiply create stack", "Y2","Substack (52)");
selectWindow("Result of Y2");
rename("52");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (52)");
close();
selectWindow("52");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=53");
imageCalculator("Multiply create stack", "Y2","Substack (53)");
selectWindow("Result of Y2");
rename("53");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (53)");
close();
selectWindow("53");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=54");
imageCalculator("Multiply create stack", "Y2","Substack (54)");
selectWindow("Result of Y2");
rename("54");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (54)");
close();
selectWindow("54");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=55");
imageCalculator("Multiply create stack", "Y2","Substack (55)");
selectWindow("Result of Y2");
rename("55");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (55)");
close();
selectWindow("55");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=56");
imageCalculator("Multiply create stack", "Y2","Substack (56)");
selectWindow("Result of Y2");
rename("56");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (56)");
close();
selectWindow("56");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=57");
imageCalculator("Multiply create stack", "Y2","Substack (57)");
selectWindow("Result of Y2");
rename("57");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (57)");
close();
selectWindow("57");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=58");
imageCalculator("Multiply create stack", "Y2","Substack (58)");
selectWindow("Result of Y2");
rename("58");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (58)");
close();
selectWindow("58");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=59");
imageCalculator("Multiply create stack", "Y2","Substack (59)");
selectWindow("Result of Y2");
rename("59");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (59)");
close();
selectWindow("59");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=60");
imageCalculator("Multiply create stack", "Y2","Substack (60)");
selectWindow("Result of Y2");
rename("60");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (60)");
close();
selectWindow("60");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=61");
imageCalculator("Multiply create stack", "Y2","Substack (61)");
selectWindow("Result of Y2");
rename("61");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (61)");
close();
selectWindow("61");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=62");
imageCalculator("Multiply create stack", "Y2","Substack (62)");
selectWindow("Result of Y2");
rename("62");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (62)");
close();
selectWindow("62");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=63");
imageCalculator("Multiply create stack", "Y2","Substack (63)");
selectWindow("Result of Y2");
rename("63");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (63)");
close();
selectWindow("63");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=64");
imageCalculator("Multiply create stack", "Y2","Substack (64)");
selectWindow("Result of Y2");
rename("64");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (64)");
close();
selectWindow("64");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=65");
imageCalculator("Multiply create stack", "Y2","Substack (65)");
selectWindow("Result of Y2");
rename("65");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (65)");
close();
selectWindow("65");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=66");
imageCalculator("Multiply create stack", "Y2","Substack (66)");
selectWindow("Result of Y2");
rename("66");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (66)");
close();
selectWindow("66");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=67");
imageCalculator("Multiply create stack", "Y2","Substack (67)");
selectWindow("Result of Y2");
rename("67");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (67)");
close();
selectWindow("67");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=68");
imageCalculator("Multiply create stack", "Y2","Substack (68)");
selectWindow("Result of Y2");
rename("68");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (68)");
close();
selectWindow("68");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=69");
imageCalculator("Multiply create stack", "Y2","Substack (69)");
selectWindow("Result of Y2");
rename("69");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (69)");
close();
selectWindow("69");
close();
selectWindow("Y1");
run("Make Substack...", "  slices=70");
imageCalculator("Multiply create stack", "Y2","Substack (70)");
selectWindow("Result of Y2");
rename("70");
roiManager("Select", 0);
roiManager("multi-measure measure_all one append");
selectWindow("Substack (70)");
close();
selectWindow("70");
close();
selectWindow("Y1");
close();
selectWindow("Y2");
close();